PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn134451
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ARR-B
Protein Properties Length: 679aa    MW: 75353.9 Da    PI: 7.0298
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn134451genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like271e-08203225225
     G2-like   2 prlrWtpeLHerFveaveqLGGse 25 
                 +r++Wt +LH++Fv av+qL G++
  Achn134451 203 TRVVWTVDLHRKFVAAVNQL-GID 225
                 79******************.555 PP

2Response_reg78.81.8e-26201281109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl vdD+p+ ++ll+++l+k +y +v++++++  al+ll+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+g+ +++ + ++ Ga 
    Achn134451  20 VLAVDDDPICLKLLETLLRKCQY-HVTTTSQAIMALKLLRENKnnFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSAYGDTKLVMKGISHGAC 114
                   799********************.***************888888*******************87754.558************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l Kp+ +e+l +
    Achn134451 115 DYLLKPVRIEQLKN 128
                   ***********987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23008.9E-4317156No hitNo description
SuperFamilySSF521724.27E-3617141IPR011006CheY-like superfamily
SMARTSM004483.0E-3218130IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011043.38319134IPR001789Signal transduction response regulator, receiver domain
PfamPF000729.9E-2420128IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.42E-2721133No hitNo description
Gene3DG3DSA:1.10.10.601.8E-8200226IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 679 aa     Download sequence    Send to blast
MTIDRSFDEP NDQFPVGMRV LAVDDDPICL KLLETLLRKC QYHVTTTSQA IMALKLLREN  60
KNNFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSAYG DTKLVMKGIS HGACDYLLKP  120
VRIEQLKNIW QHVVRRKKTD SKDQNNSDKP CHETEGGQAV TGTGDSDQNG KLNRKKKDQK  180
DDENEDRGDG GHKNEDQSTQ KRTRVVWTVD LHRKFVAAVN QLGIDNSPYL RMGYLNGLGN  240
VPCMVGSAQF QNADVRSLSS SGMLGRLNTP VGLGMRGLSS SGMVQLGHAD NLSEPINNQN  300
KFHQVILPGN QNGNILQGMP MPFEFDQLQH KNVVDHIGDL SSANNGSMVF PISSGLSDGS  360
MNGNSSRNSF LGTPHNPVML QGQPQGIKRD ELRGNQSFVT VASSNREYSS LLPNFRRCID  420
GWPTVQSSEI QSNSFKSSDC FKQDTPNYLI ERKSSIAMDT GNKSNDNSSI AAVPAGFPVL  480
RTDLQSQAAP RQRSNAEKNM NHTEKQGWDE NKANPSHGPN LMCSSMSSNN MIGQQNLVDS  540
STMQHNEVEQ SALGTTANPK QGNLINQRKP QDGYSFDDVG SLEDLVTAMM KQDSALGKQP  600
VGVREPVGKH RLLLSFTREI SLVEWRSCPI RNQSWLLQWR EVGLWALTCL EIRVHVVVRN  660
GVLGFLDHRG YCHEAFFF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3jte_A4e-12191385125Response regulator receiver protein
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002282928.10.0PREDICTED: two-component response regulator ARR12-like isoform X1
RefseqXP_010648700.10.0PREDICTED: two-component response regulator ARR12-like isoform X2
SwissprotP625981e-107ARR12_ARATH; Two-component response regulator ARR12
TrEMBLF6H3J30.0F6H3J3_VITVI; Putative uncharacterized protein
STRINGVIT_04s0008g05900.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22582458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-82response regulator 12